Generic function TERM-GENE-PRODUCTS
Package:
GODB
Syntax:
term-gene-products go-handle go-term => list-of-gene-product-objects
Arguments and Values:
go-handle
---an object of type go-handle
go-term
---an object of type term
Description:
The generic function term-gene-products is used to find the gene products associated with a term. It takes two parameters, go-handle, to preserve the session, and go-term to identify the term whose gene products are to be found. It returns a list of objects of type GENE PRODUCT.
Known Methods:
-
term-gene-products (go-handle-object go-handle) (go-term-object go-term) => list-of-gene-product-objects
Affected By:
None.
Examples:
cl-prompt: (godb:term-gene-products mygohandle (godb:get-term mygohandle 203)) (#<GODB:GENE-PRODUCT 2060CBE4> #<GODB:GENE-PRODUCT 2060CBB4>)
cl-prompt: (godb:term-gene-products mygohandle (godb:get-term-by-acc mygohandle "GO:0000140")) (#<GODB:GENE-PRODUCT 2061A574> #<GODB:GENE-PRODUCT 2061A544>)
cl-prompt: (godb:term-gene-products mygohandle (godb:get-term-by-name mygohandle "killing of host cells")) NIL
Exceptional Situations:
None.
See Also:
Notes:
The function first checks if each gene product is currently indexed. If it is, it's returned. Otherwise a new object is created and then indexed and returned.
News
News in chronological order, most recent on top.
- 2005-06-14
Completed description.
© 2005, Samantha Kleinberg, all rights reserved.